Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| DDJ364 | DDJ364 | Senegal | 1996 | HIV1 | CRF02_AG | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K20I, M36I, R41K, H69K, K70R, V82I, L89M |
| >DDJ364| codons 1-99 PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKRAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K11T, V35T, E36D, K122E, D123S, I135T, I142V, S162A, K173S, D177E, Q207A, R211K, V245E, E248D, D250E, T286A, E291D, V292I, I293V, P294I, E312N, I326V, G335D, A355T, M357K, G359S, K366R, T369V, A371V, I375V, A376V, A400T, T403M, W410Y, E432D, S468P, D471E, Q480Y, L491S, E492T, K512R, L517I, S519N, Q524K, K527E, K530R, A534S, A554S |
| >DDJ364| codons 1-560 PISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQASMTKILEPFRSQNPEIVI YQYMDDLYVGSDLEIGQHRTKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPDKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVILTEEAE LELAENREILKNPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKYTRKRSA HTNDVRQLVEVVQKVVTESIVIWGKTPKFKLPIQKETWETWWMEYWQATYIPEWEFVNTP PLVKLWYQLEKDPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPLTETTNQKTELY AIHLALQDSGSTVNIVTDSQYALGIIQAQPDRSESEIVNQIIEKLIEKERVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, V31I, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T218I, L234I, A265V | S283G |
| >DDJ364| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSAAVKAACWWANVTQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKVKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Meloni, ST | Distinct human immunodeficiency virus type 1 subtype A virus circulating in West Africa: sub-subtype A3. | J Virol, 2004 |