Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 02BR034 | 02BR034 | Brazil | 2002 | HIV1 | F | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | PI|RTI | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L90M | G16E, K20M, E35D, M36V, R41K, K43R, R57K, Q61N, L89M |
| >02BR034| codons 1-99 PQITLWQRPLVTIKIEGQLMEALLDTGADDTVLEDVNLPGKWRPKMIGGIGGFIKVKQYD NILIEICGHKAIGTVLVGPTPVNIIGRNMMTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| Y181C | E6R, V35T, T39L, V90I, V118I, K122E, S162C, E169D, K173T, Q174K, T200A, Q207E, R211K, F214L, H221Y, L228H, V245Q, E248D, A272P, T286A, V292I, I293V, E297A, R356K, G359S, T377L, K390R, Q394L, E399D, A400T, K431T, V435A, A446S, L452K, V466A, D471E, T477A, H483Q, L491S, E492K, A502V, E514D, S519N, K527E, A534S |
| >02BR034| codons 1-560 PISPIRTVPVKLKPGMDGPKVKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPFRTKNPDIVI CQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPDKKYQKEPPFHWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTEIVPLTAEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRSA HTNDVKQLTEAVQKIALESIVIWGKTPKFRLPILKETWDTWWTEYWQATWIPEWEFVNTP PLVKLWYQLETEPIAGAETFYVDGASNRETKKGKAGYVTDRGRQKAVSLTETTNQKAELQ AIQLALQDSGSKVNIVTDSQYVLGIIQAQPDKSDSELVNQIIEQLIEKEKVYLSWVPAHK GIGGNEQVDKLVSAGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| V151I | S17N, A21S, L101I, T112I, V201I, L234V, D256E | S283G, R284G |
| >02BR034| codons 1-288 FLDGIDKAQEEHEKYHNNWRSMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKIIHTDNGSN FTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGGQDED |
References
| Author | Title | Citation |
| Sanabani, S | Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in Sao Paulo, Brazil. | Infect Genet Evol, 2006 |