Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA14400 | CA84246 | U.S. | 2007 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | 3TC+D4T+NVP | 365 |
| 2 | 3TC+ATV+DDI+RTV+TDF | 26 |
| 3 | None | 39 |
| 4 | 3TC+ATV+DDI+RTV+TDF | 22 |
| 5 | None | 39 |
| 6 | ATV+DDI+FTC+TDF | 27 |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M184V | K103N | T27P, V35I, V90I, K102KR, K122E, I135IV, T139R, D177DE, T200A, R211K, K281KR, T286A, A288S, E297K, S322T, Q334L, A355AT, R358K, G359S, A376S, T386L, E404D, K454R, K512R, L517I, S519N, V531I, K550R |
| >CA84246| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLPEEKIKALIEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKRNKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSVNNERPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVI YQYVDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGAKSLTEVIPLTKEAE LELAENREILKEPVHGVYYDPTKDLIAEIQKQGLGQWTYQIYQEPFKNLKTGKYTRMKSA HTNDVKQLTEAVQKISTESIVIWGKLPKFKLPIQKETWEAWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIVGAETFYVDGAANRETKLGRAGYVTDRGRQKVVSLTDTTNQKTELQ AIHLALQDSGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIEQLIKKEKIYLAWVPAHK GIGGNEQVDRLVSAGIRKVL |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| E35D, N37NS, R41K, D60E, L63P, V77VI |
| >CA84245| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMSLPGKWKPKMIGGIGGFIKVRQYE QIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNF |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |