Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
065 | CS_065 | Cote d'Ivoire | 2004 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC|AZT|D4T|DDI|EFV|NFV | 167 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10LV, I13V, K14R, K20I, M36I, R41K, K43KR, L63S, I64M, H69K, A71AV, I72T, L89M |
>CS_065| codons 1-99 PQITLWQRPVVTVRIGGQLIEALLDTGADDTVLEEINLPGKWRPKMIGGIGGFIKVRQYD QISMEICGKKVTGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184MV | V35T, E36D, D121H, K122E, I135V, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, V245Q |
>CS_065| codons 1-268 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRAKNPEMVI YQYVDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWAS |
References
Author | Title | Citation |
Seyler, C | Impact of genotypic drug resistance mutations on clinical and immunological outcomes in HIV-infected adults on HAART in West Africa. | AIDS, 2007 |