<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CHB353 06_C353 South Africa 2006 HIV1 C Plasma None

Treatment History
Order Regimen Weeks
1 NVP 1
2 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
    K103KN, V106VA V179D V35T, E36A, T39E, E40D, S48T, K104R, V118I, K122E, D123S, E138A, T139A, T165I, K173T, Q174K, T200A, I202V, Q207G, R211K, F214L, V245Q, E248D, A272P, T286TA, E291D, V292I, I293V L295LV
>06_C353| codons 1-299
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKITKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNRSATVLDVGDAYFSIPL
DESFRKYTAFTIPSINNAAPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRTKNPDIDI
YQYMDDLYVGSDLEIGQHRAKVEELRGHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPVTEEA

References
Author Title Citation
Seoighe, C A model of directional selection applied to the evolution of drug resistance in HIV-1. Mol Bio Evol, 2007