Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| PL0710 | PL0710 | Nigeria | 2001 | HIV1 | CRF02_AG | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63A, H69K, L89M |
| >PL0710| codons 1-99 PQITLWQRPLVAVRIEGQLIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QIAIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V21I, V35T, T39M, I135V, S162A, K173T, Q174S, D177E, T200A, Q207G, R211K, V245K, D250E, S251D, K275R, V276I, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376T, T377V, K390R, A400T, T403V, E432D, V435P, A437I, S468T, D471E, Q480H, L491S, E492Q, K512R, L517I, S519N, Q524K, K527E, E529D, A534S, A554N, I556V |
| >PL0710| codons 1-560 PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICMEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTSNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKEDWTVNDIQKLVGKLNWASQIYAGIRIKQLCKLLRGAKALTDIVTLTEEAE LELAENREILKEPVHGVYYDPTKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSA HTNDVKQLTEVVQKVTVESIVIWGKTPKFRLPIQKETWETWWVEYWQATWIPEWEFVNTP PLVKLWYQLEKDPIPGIETFYVDGAANRETKLGKAGYVTDRGRQKVVTLTETTNQKTELH AIHLALQDSGSQVNIVTDSQYALGIIQAQPDRSESEIVNQIIEKLIEKDKVYLSWVPAHK GIGGNEQVDKLVSNGVRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E11D, K14R, V31I, K34R, M50I, S57G, A91S, L101I, K111R, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I, D256E | S283G |
| >PL0710| codons 1-288 FLDGIDKAQEDHERYHSNWRAMASDFNLPPIVAREIVASCDKCQLKGEAIHGQVDCGPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPSETGQETAYFILKLAGRWPVRVIHTDNGSN FTSAAVKAACWWANITQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Carr, JK | HIV subtype and drug resistance patterns among drug-naive infected persons in Jos, Nigeria. | Direct Genbank Submission, 2005 |