Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01NGPL0669 | 01NGPL0669 | Nigeria | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L10I, I13V, K14R, K20I, E35Q, M36I, R41K, R57K, L63P, C67E, H69K, V82I, L89M |
| >01NGPL0669| codons 1-99 PQITLWQRPIVTVRIGGQLIEALLDTGADDTVLEQINLPGKWKPKMIGGIGGFIKVKQYD QIPIEIEGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, K49R, V60I, K122E, D123S, K173T, D177E, I178M, T200A, Q207N, V245Q, E248D, D250E, S251N, E291D, V292I, I293V, K311R, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, K366R, T386V, Q394R, A400V, E404D, E413D, Q428R, K431T, V435P, R461K, R463K, V467I, S468T, L469I, T470Q, D471E, Q480H, H483Q, L491S, K512R, S519N, K530R, A534T, A554N |
| >01NGPL0669| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPEMVI YQYMDDLYVGSDLEIGQHRAKIEELRNHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKENWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTDIVPLTEEAE LELAENREILREPVHGVYYDPSKDLIAEVQKQGPDQWTYQIYQEPYKNLKTGKYAKRGSA HTNDVRQLTEAVQKIATESIVIWGKVPKFKLPIRKETWEVWWTDYWQATWIPDWEFVNTP PLVKLWYRLETEPIPGAETFYVDGAANRETKLGKAGYVTDKGKQKVITIQETTNQKTELH AIQLALQDSGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIEQLIKKERVYLTWVPAHK GIGGNEQVDKLVSNGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, S24N, L101I, T112V, T124S, T125A, G134S, K136T, V201I, T206S, L234I, D256E | S283G |
| >01NGPL0669| codons 1-288 FLDGIDKAQEEHERYHSNWRAMANDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSSAVKAACWWASITQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Carr, JK | HIV subtype and drug resistance patterns among drug-naive infected persons in Jos, Nigeria. | Direct Genbank Submission, 2005 |