Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01NGPL0674 | 01NGPL0674 | Nigeria | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, K20I, E35Q, M36I, N37D, R41K, R57K, L63P, C67E, H69K, V82I, L89M |
| >01NGPL0674| codons 1-99 PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEQIDLPGKWKPKMIGGIGGFIKVKQYD QIPIEIEGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E40D, K49R, V60I, K102R, K104R, K122E, D123N, A158S, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248N, D250E, A272P, T286A, E291D, V292I, I293V, P294T, Q334L, G335D, F346H, R356K, M357R, R358G, G359T, T377Q, T386V, Q394R, A400V, E413D, K431T, V435P, F440Y, L452V, R461K, R463K, V466I, V467L, S468T, L469I, T470Q, D471E, Q480H, H483Q, L491S, K512R, E516A, S519N, A534T, A554S |
| >01NGPL0674| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKRSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRTKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGLDQWTYQIYQEPHKNLKTGKYAKRGTA HTNDVKQLTEAVQKIAQESIVIWGKVPKFKLPIRKETWEVWWTEYWQATWIPDWEFVNTP PLVKLWYQLETEPIPGAETYYVDGAANRETKVGKAGYVTDKGKQKILTIQETTNQKTELH AIQLALQDSGSEVNIVTDSQYALGIIQAQPDRSESALVNQIIEQLIKKEKVYLTWVPAHK GIGGNEQVDKLVSSGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E92A, T125K | K14R, V31I, P90S, Y99F, L101I, T112I, G134N, K136T, V201I, T206S, L234I, S255N, D256E |
| >01NGPL0674| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVISAATGQETAFFILKLAGRWPVKIIHTDNGSN FTSTKVKAACWWANITQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNNEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED |
References
| Author | Title | Citation |
| Carr, JK | HIV subtype and drug resistance patterns among drug-naive infected persons in Jos, Nigeria. | Direct Genbank Submission, 2005 |