Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| PL0209P | PL0209P | Nigeria | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L10M, I13V, K14R, K20I, E35Q, M36I, R41K, R57K, C67E, H69K, L89M |
| >PL0209P| codons 1-99 PQITLWQRPMVTVRIGGQLIEALLDTGADDTVLEQINLPGKWKPKMIGGIGGFIKVKQYD QILIEIEGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, V60I, D121H, K122E, I135V, I142IV, K173L, Q174KR, D177E, I178L, T200A, Q207D, V245Q, D250E, S251D, K277R, T286A, E291D, V292I, I293V, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A376S, T377M, T386V, Q394K, A400I, E413D, K431T, V435L, F440Y, V458I, R461K, R463K, V467I, S468T, L469I, T470Q, D471E, Q480H, H483IL, Q487K, L491S, K512R, S519N, E529D, V531I, A534T, A554N | Q258QR |
| >PL0209P| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLRNPELVI YQYMDDLYVGSDLEIGQHRAKIEELRDHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKEDWTVNDIRKLVGKLNWASQIYAGIKVRQLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEVQKQGLDQWTYQIYQEPYKNLKTGKYAKRGSA HTNDVKQLTEAVQKISMESIVIWGKVPKFKLPIKKETWEIWWTEYWQATWIPDWEFVNTP PLVKLWYQLETEPILGAETYYVDGAANRETKLGKAGYITDKGKQKVITIQETTNQKTELH AILLALKDSGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIEQLIKKDKIYLTWVPAHK GIGGNEQVDKLVSNGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14KR, V31I, L101I, T124A, T125A, G134D, I135V, K136T, I182V, V201I, T206S, L234I, S255N, D256E, D270E | S283G, D288N |
| >PL0209P| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGSN FTSAAVKAACWWADVTQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FVHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNNEIKVVPRRKAKIIREYGKQMAGDDCVAGRQDEN |
References
| Author | Title | Citation |
| Carr, JK | HIV subtype and drug resistance patterns among drug-naive infected persons in Jos, Nigeria. | Direct Genbank Submission, 2005 |