Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
12-3078 | 3078-30404 | Canada | 2003 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | PI|NRTI|NNRTI | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46I, I54V, V82S | L10F, L24I, F53FL, Q58E | K20R, E35D, M36I, N37D, R41K, D60E, I62V, L63P, I64V, T74S |
>3078-30404| codons 4-99 TLWQRPFVTIKIGGQLREALIDTGADDTVLEDIDLPGKWKPKIIGGIGGLVKVREYEQVP VEICGHKAIGSVLVGPTPSNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, D67N, K70R, L74I, M184V, T215F | K219Q | K103N | T39A, K43E, T69N, V118I, K122P, D123E, I135T, D177E, F214L, K223Q, L228H, Q242H |
>3078-30404| codons 38-247 CAELEEEGKISKIGPENPYNTPVFAIKKKNSNRWRKIVDFRELNKRTQDFWEVQLGIPHP AGLKKNKSVTVLDVGDAYFSIPLDPEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSP AIFQSSMTKILEPFRKQNPEIVIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLRWGLFTP DQKHQQEPPFHWMGYELHPDKWTVHPIVLP |
References
Author | Title | Citation |
Baxter, JD | Genotypic changes in human immunodeficiency virus type 1 protease associated with reduced susceptibility and virologic response to the protease inhibitor tipranavir. | J Virol, 2006 |