Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
BAA154769 | BAA154769 | Singapore | 2002 | HIV1 | CRF01_AE | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT+DDI | 178 |
2 | 3TC+AZT+EFV | 104 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
D67N, T69D, K70R, T215F | K219Q | K11T, V35T, T39K, K43A, V60I, K122E, D123N, I135T, S162SN, K173IL, Q174K, D177E, I178M, G196E, Q207A, R211S, K238R, V245E, A272AP, T286A, A288T, E291ED, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R |
>BAA154769| codons 1-400 PISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEAEGKISKIGPENPYNTPI FAIKKKNSDRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQNSMTKILEPFRLKNPEMVI YQYMDDLYVGSDLEIEQHRTKIEELRAHLLSWGFFTPDQKHQKEPPFLWMGYELHPDRWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKTLTDIVPLTEEAE LELAENREILKTPVHGVYYDPSKDLVAEVQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA HTNDVRQLTEVVQKIATESIVIWGKTPKFRLPIQKETWEA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, E35D, M36I, R41K, H69K, K70R, L89M |
>BAA154769| codons 1-99 PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
References
Author | Title | Citation |
Hsu, LY | Characterization of mutations in CRF01_AE virus isolates from antiretroviral treatment naive and experienced patients in Singapore. | JAIDS, 2005 |