<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
U1916 02BU.U1916 Burundi 2002 HIV1 D PBMC None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35K, T39A, K49R, V60I, S68N, D121Y, K122E, D177E, I178M, E194D, T200M, Q207G, R211K, K238R, V245Q, D250E, L260I, A272P, L282C, I293V, L303M, G335D, P345Q, F346Y, R356K, M357L, R358K, K374R, T377Q, S379C, K388R, K390R, E399G, A400T, E404D  
>02BU.U1916| codons 1-429
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALKEICAEMEKEGKISRIGPENPYNTPI
FAIKKKDNTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
YEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVI
YQYMDDLYVGSDLDIGQHRMKIEELRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDRWT
VQPIQLPEKESWTVNDIQKIVGKLNWASQIYPGIKVKQLCKCLRGTKALTEVVPLTEEAE
LEMAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEQYKNLKTGKYAKLKGA
HTNDVKQLTEAVQRIAQECIVIWGKTPRFRLPIQKETWGTWWTDYWQATWIPEWEFVNTP
PLVKLWYQL

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, G17E, N37H, R41K, Q61N, I64V, H69Y, I72T  
>02BU.U1916| codons 1-99
PQITLWQRPLVTVKIGEQLKEALLDTGADDTVLEEMHLPGKWKPKMIGGIGGFIKVRQYD
NILVEICGYKATGTVLVGPTPVNIIGRNLLTQIGCTLNF

References
Author Title Citation
Vidal, N HIV type 1 diversity and antiretroviral drug resistance mutations in Burundi. ARHR, 2007