Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01TZA280 | 01TZA280 | Tanzania | 2001 | HIV1 | D | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| E6A, V35T, K49R, V60I, I135T, D177E, Q207D, R211K, V245K, D250E, A272S, T286A, E297K, K311R, P313T, V317A, G333E, R356K, A360T, T377L, S379G, T386I, K390R, A400T, V435I, K451R, R461K, H483N, V496I, A554S |
| >01TZA280| codons 1-560 PISPIATVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIVI YQYMDDLYVGSDLEIGQHRTKIEELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKESWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLLRGAKALTEVIPLTKEAE LELAENREILRETVHGAYYDPSKDLIAEIQKQEQGQWTYQIYQEPFKNLKTGKYAKMRGT HTNDVKQLTEAVQKIALEGIVIWGKIPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKLWYQLEKEPIIGAETFYVDGAANRETRLGKAGYVTDKGRQKVVSLTDTTNQKTELQ AINLALQDSGLEVNIITDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHK GIGGNEQVDKLVSSGIRKVL |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| N37S, R41K, H69Q |
| >01TZA280| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKMIGGIGGFIKVRQYD QILIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E11D, K14R, P30S, S39C, I72V, L101I, T112V, T124A, K156R, V201I, T206S, I208L, K211T, L234I, N254H, M275V |
| >01TZA280| codons 1-288 FLDGIDKAQEDHERYHSNWRAMASDFNLPSVVAKEIVACCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNRELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDLQTTELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDHSDIKVVPRRKAKIIRDYGKQVAGDDCVASRQDED |
References
| Author | Title | Citation |
| Arroyo, MA | HIV type 1 subtypes among blood donors in the Mbeya region of southwest Tanzania. | ARHR, 2004 |