Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 92NG003 | 92NG003 | Nigeria | 1992 | HIV1 | CRF02_AG | PBMC | MC |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E11D, K14R, V31I, I72V, L74I, T112V, T124A, T125A, V126M, G134N, K136Q, V201I, T206S, T218I, L234I, D256E, A265V, R269K, D278G | S283G |
| >92NG003| codons 1-288 FLDGIDKAQEDHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVIHTDNGSN FTSAAMKAACWWANIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKVKIIKDYGKQMAGGDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, K20I, E35Q, M36I, R41K, R57K, C67E, H69K, V82I, L89M |
| >92NG003| codons 1-99 PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEQINLPGKWKPKMIGGIGGFIKVKQYD QILIEIEGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E40D, V60I, K104R, V118I, K122E, D123N, K173T, Q174E, D177E, I195T, T200A, Q207N, V245Q, E248N, D250E, A272P, T286A, E291D, V292I, I293V, D324E, I329L, Q334C, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, Q394R, A400V, E413D, Q428R, K431T, V435P, F440Y, R448K, R463K, V466I, V467I, S468T, L469I, T470Q, D471E, Q480H, H483Q, L491S, K512R, S519N, A534T, A554S | M16I |
| >92NG003| codons 1-560 PISPIETVPVKLKPGIDGPKVKQWPLTEEKIKALTEICTDMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSIPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTENPEIVI YQYMDDLYVGSDLETGQHRAKIEELRNHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKELIAELQKQGCDQWTYQIYQEPYKNLKTGKYAKRGSA HTNDVKQLTEAVQKIATESIVIWGKVPKFKLPIRKETWEVWWTEYWQATWIPDWEFVNTP PLVKLWYRLETEPIPGAETYYVDGAANKETKLGKAGYVTDRGKQKIITIQETTNQKTELH AIQLALQDSGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIEQLIKKEKVYLTWVPAHK GIGGNEQVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Gao, F | A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1. | J Virol, 1998 |