Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 2931HA | 2931HA | Cameroon | 2003 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E10D, V31I, L101V, T112V, S119P, T122I, T124A, T125A, G134D, D167E, V201I, T206S, I208M, T218I, L234I, D256E | V281M, S283G |
| >2931HA| codons 1-288 FLDGIDKAQDEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFVLKLAGRWPVKVIHTDNGPN FISAAVKAACWWADIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDMQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCMAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M |
| >2931HA| codons 1-99 PQITLWQRPLVTVKIGGQPIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V21I, V35T, T39N, E40D, V60I, A98S, K104R, D123K, I135V, K173A, D177E, T200V, Q207K, V245Q, Y271F, A272P, K275R, K277R, Q278E, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, F346H, R356K, M357R, R358G, G359S, V381I, T386L, K390R, A400T, E404D, E432D, V435I, R461K, D471E, Q480Y, L491S, L517I, S519N, K527R, A534S, A554K |
| >2931HA| codons 1-560 PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICNDMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKRSVTVLDVGDAYFSVPL DKKFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPEIVI YQYMDDLYVGSDLEIGQHRVKIEELRKHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIFPGIRVRELCKLLRGAKALTDIVTLTEEAE LELAENREILKEPVHGVYYDPAKDLVAEIQKQGQDQWTYQIYQEPHKNLKTGKYAKRGSA HTNDVKQLTEAVQKIATESIIIWGKLPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKDPIIGAETFYVDGAANRETKLGKAGYVTDKGRQKVVSLTETTNQKTELY AIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIRKEKVYLSWVPAHK GIGGNEQVDKLVSKGIRKVL |
References
| Author | Title | Citation |
| Carr, JK | High genetic complexity of HIV-1 in low-prevalence, rural regions of Cameroon. | Direct Genbank Submission, 2006 |