Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| DDJ362 | DDJ362 | Senegal | 1996 | HIV1 | CRF02_AG | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| S24N, V31I, V32I, I72V, L74I, T112V, T124A, T125A, G134N, I135V, K136T, V165I, D167E, V201I, T206S, L234I, D279G | S283G |
| >DDJ362| codons 1-288 FLDGIDKAQEEHEKYHSNWRAMANDFNLPPIIAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVIHTDNGSN FTSAAVKAACWWANVTQEFGIPYNPQSQGVVESMNKELKKIIGQIREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDGCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K20I, E35D, M36I, R41K, K43R, F53Y, L63S, H69K, L89M |
| >DDJ362| codons 1-99 PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEDINLPGKWRPKMIGGIGGYIKVRQYD QISIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36A, T39E, K104Q, D123E, I135R, I142V, S162Y, K173L, D177E, V179I, Q207A, R211K, V245Q, T286A, E291D, V292I, I293V, E297K, E312D, D324E, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376S, E396D, A400T, T403M, W410Y, E432D, R461K, D471E, Q480H, L491A, E492Q, K512R, L517I, S519N, Q524K, I526V, K527E, A534S, A554S |
| >DDJ362| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKQSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSRNNETPGVRYQYNVLPQGWKGSPAIFQYSMTKILEPFRLQNPEIII YQYMDDLYVGSDLEIGQHRTKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVPLTKEAE LELAENREILKDPVHGVYYDPSKELIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA HTNDVRQLVEVVQKVSTESIVIWGKTPKFKLPIQKDTWETWWMEYWQATYIPEWEFVNTP PLVKLWYQLEKDPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVSLTETTNQKTELH AIHLALQDSGAQVNIVTDSQYALGIIQAQPDRSESEIVNQIIEKLVEKEKVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Meloni, ST | Distinct human immunodeficiency virus type 1 subtype A virus circulating in West Africa: sub-subtype A3. | J Virol, 2004 |