Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 02HNsq4 | 02HNsq4 | China | 2002 | HIV1 | B | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| L68V | K71Q, V88I, A91T, L101I, T112A, S119R, T124N, T125A, K156N, K211R |
| >02HNsq4| codons 1-288 FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHVEGQIILVAVHVASGYIEAEIIPTETGQETAYFILKLAGRWPVKAIHTDNGRN FTSNAVKAACWWAGIKQEFGIPYNPQSQGVVESMNNELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIVDIIATDIQTRELQKQITKIQNFRVYYRDSRDPLWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| E35D, R41K, L63P, I72V, V77I, I93L |
| >02HNsq4| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGKWKPKMIGGIGGFIKVRQYD QIPIEICGHKAVGTVLIGPTPVNIIGRNLLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| I135V, S162C, T200A, V245E, Q278E, L283I, I293V, T296S, P313S, Q334L, F346Y, T377S, V417I, V435E, D460N, R461K, S468T, L491V, Q520K, V548I | S156P, A299V |
| >02HNsq4| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGPPAIFQCSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKELCKLIRGTKALTEVVPLSEEVE LELAENREILKESVHGVYYDPSKDLIAEIQKQGLGQWTYQIYQEPYKNLKTGKYARMRGA HTNDVKQLTEAVQKIASESIVIWGKTPKFKLPIQKETWEAWWTEYWQATWIPEWEFINTP PLVKLWYQLEKEPIEGAETFYVDGAANRETKLGKAGYVTNKGRQKVVTLTDTTNQKTELQ AIHLALQDSGVEVNIVTDSQYALGIIQAQPDKSESELVSKIIEQLIKKEKVYLAWVPAHK GIGGNEQIDKLVSAGIRKVL |
References
| Author | Title | Citation |
| Liu, L | Genetic characterization of full-length HIV type 1 genomes from 3 infected paid blood donors in Henan, China. | JAIDS, 2005 |