Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01NGPL0760 | 01NGPL0760 | Nigeria | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, V31I, M50V, L101I, T112V, T124N, G134N, K136T, I162V, V201I, T206S, I208L, L234I, S255N, D256E | S283G |
| >01NGPL0760| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAVHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSN FTSNTVKAACWWANITQEFGIPYNPQSQGVVESMNKELKKIVGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDLQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNNEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K20I, E35Q, M36I, N37D, R41K, R57K, C67E, H69K, V82I, L89M |
| >01NGPL0760| codons 1-99 PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEQIDLPGKWKPKMIGGIGGFIKVKQYD QILIEIEGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, V60I, K122E, D123S, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q, E248N, A272P, I274V, T286A, E291D, V292I, I293V, P321S, D324E, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, A376S, T386V, K390R, Q394R, A400V, E413D, Q428R, K431T, V435P, F440Y, R461K, R463K, V467I, S468T, L469I, T470Q, D471E, Q480H, H483Q, L491S, S519N, K530R, A534T, A554S, I556V |
| >01NGPL0760| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEMVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNKDSWTVNDIQKLVGKLNWASQIYPGVKVKQLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDSSKELIAEVQKQGLDQWTYQIYQEPYKNLKTGKYAKRGSA HTNDVKQLTEVVQKISTESIVIWGKVPKFRLPIRKETWEVWWTEYWQATWIPDWEFVNTP PLVKLWYRLETEPIPGAETYYVDGAANRETKLGKAGYVTDKGKQKVITIQETTNQKTELH AIQLALQDSGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKERVYLTWVPAHK GIGGNEQVDKLVSSGVRKVL |
References
| Author | Title | Citation |
| Carr, JK | HIV subtype and drug resistance patterns among drug-naive infected persons in Jos, Nigeria. | Direct Genbank Submission, 2005 |