Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| SM_02YE516 | 02YE516 | Yemen | 2002 | HIV1 | D | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| D6N, K7Q, E11D, E13D, L28I, L45Q, T112V, I113V, T124G, T125A, V201I, L234I, A265V | S283G |
| >02YE516| codons 1-288 FLDGINQAQEDHDKYHSNWRAMASDFNIPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN FTSGAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKVKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| K14N, L19Q, E35D, M36I, N37D, R41K, D60E, I62V, I64V |
| >02YE516| codons 1-99 PQITLWQRPLVTINIGGQQKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQYE QVLVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35I, K49R, V60I, K122E, D123S, I135T, S162C, D177E, I178L, E204K, Q207E, F214L, V245T, E248Q, D250E, S251N, A272P, K281R, T286A, E291D, E297R, K311R, I329V, Y339W, A371V, T377Q, K390R, T403M, V435I, S468P, L469F, H483N, L491S, L517V, A554S |
| >02YE516| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPELVI YQYMDDLYVGSDLEIGQHRTKIEKLREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPITLPQKENWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTDVIPLTREAE LELAENREILREPVHGVYYDPSKDLIAEVQKQGQGQWTWQIYQEPFKNLKTGKYARMRGA HTNDVKQLTEVVQKIAQESIVIWGKTPKFRLPIQKETWEAWWMEYWQATWIPEWEFVNTP PLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPFTDTTNQKTELQ AINLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEVVSQIIEQLIKKEKVYLAWVPAHK GIGGNEQVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Saad, MD | HIV type 1 strains common in Europe, Africa, and Asia co-circulate in Yemen. | ARHR, 2005 |