Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| SM_01YE386 | 01YE386 | Yemen | 2001 | HIV1 | D | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| S17N, A21S, A23V, S24G, D25E, L28I, M50L, T112V, S119G, T122I, T124A, T125A, V165I, V201I, L234I, D256E | S195SN |
| >01YE386| codons 1-288 FLDGIDKAQEEHEKYHNNWRSMVGEFNIPPVVAKEIVASCDKCQLKGEALHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVIHTDNGGN FISAAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQIRDQAEHLKTAVQMAV FIHNFKRKGGIGGYNAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| L10V, I13V, K14M, R41K, I64V |
| >01YE386| codons 1-99 PQITLWQRPVVTVMIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYD QILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K11R, V35T, T39A, E40D, K49R, V60I, D121H, K122E, D123E, I135T, I142T, D177E, I178V, T200I, Q207E, R211K, F227S, V245K, D250E, A272P, K277R, L282C, T286A, I293V, G335D, P345Q, F346Y, R356K, T377Q, S379C, K390R, A400T, V435A, N447S, L452I, H483N, Q507H, S519N, A534S, A554N, I556V, V559I |
| >01YE386| codons 1-560 PISPIETVPVRLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEEFRKYTAFTIPSTNNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEVVI YQYMDDLYVGSDLEIGQHRIKIEELREHLLKWGFTTPDKKHQKEPPSLWMGYELHPDKWT VQPIKLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCLRGAKALTEVVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEQYKNLKTGKYAKMRGA HTNDVKQLTEAVQKIAQECIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKLWYQLEKEPIAGAETFYVDGAASRETKIGKAGYVTDRGRQKVVSLTDTTNQKTELQ AINLALQDSGLEVNIVTDSQYALGIIHAQPDKSESELVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSNGVRKIL |
References
| Author | Title | Citation |
| Saad, MD | HIV type 1 strains common in Europe, Africa, and Asia co-circulate in Yemen. | ARHR, 2005 |