Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CM52876 | CM52876 | Cameroon | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, D25E, V31I, A91E, L101I, T112V, S119R, T124N, T125A, G134N, I135V, K136T, V201I, T206S, L234I, R269K | S283G |
| >CM52876| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASEFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPEETGQETAYFILKLAGRWPVKVIHTDNGRN FTSNAVKAACWWANVTQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIKDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, K20I, M36I, R41K, H69K, L89M |
| >CM52876| codons 1-99 PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, D123E, I142V, K173A, Q174K, D177E, I178L, Q207E, P243A, V245Q, E248D, D250S, A272P, Q278H, T286A, E291D, I293V, E297A, L303M, Q334H, G335D, F346H, R356K, M357R, G359S, T386V, K390R, A400T, L425V, K431T, V435L, L452I, V466I, D471E, L491S, Q509H, S519N, K527Q, A534S, A554T |
| >CM52876| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPELVI YQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQAIQLPDKSSWTVNDIQKLVGKLNWASQIYPGIKVKHLCKLLRGAKALTDVVPLTAEAE LEMAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPHKNLKTGKYAKRRSA HTNDVKQLTEAVQKIATESIVIWGKVPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKVWYQLETEPILGAETFYVDGAANRETKIGKAGYVTDRGRQKIVSLTETTNQKTELQ AIHLALQDSGSEVNIVTDSQYALGIIQAHPDKSESELVNQIIEQLIQKEKVYLSWVPAHK GIGGNEQVDKLVSTGIRKVL |
References
| Author | Title | Citation |
| Carr, JK | The AG recombinant IbNG and novel strains of group M HIV-1 are common in Cameroon. | Virology, 2001 |