Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01IC_17395 | 01_17395 | Cote d'Ivoire | 2001 | HIV1 | G | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, V32I, S39N, L45Q, L101I, T112V, I113V, T124A, T125A, G134N, K136T, V201I, T206S, L234I, D270H | S283G |
| >01_17395| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPVIAKEIVANCDKCQQKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVVHTDNGSN FTSAAVKAACWWANITQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRHYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12K, I13V, K14R, G16E, K20I, M36I, R41K, L63M, H69K, L89M |
| >01_17395| codons 1-99 PQITLWQRPLVKVRIEGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QIMIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V21I, V35T, T39L, I135T, K173I, Q174K, D177E, T200A, Q207E, R211K, P243S, V245Q, E248D, K249Q, D250E, T286A, E291D, V292I, I293V, P294T, G335D, R356K, M357K, G359S, A371V, I375V, A376I, I380V, A400T, T403A, E432D, V435M, R461K, D471E, Q480H, H483Y, L491Q, K512R, S519N, Q524K, K527E, A534S, A554N, K558R |
| >01_17395| codons 1-560 PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQSIQLPDQESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVTLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSA HTNDVKQLTEVVQKVITESVVIWGKTPKFKLPIQKETWETWWAEYWQATWIPEWEFVNTP PLVKLWYQLEKDPIMGAETFYVDGAANRETKLGKAGYVTDKGRQKVVSLTETTNQKTELH AIYLALQDSGQEVNIVTDSQYALGIIQAQPDRSESELVNQIIEKLIEKEKVYLSWVPAHK GIGGNEQVDKLVSNGIRRVL |
References
| Author | Title | Citation |
| Toni, T | Presence of CRF09_cpx and complex CRF02_AG/CRF09_cpx recombinant HIV type 1 strains in Cote d'Ivoire, West Africa. | ARHR, 2005 |