Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 94UFRJ_58 | 94UFRJ_58 | Brazil | 1994 | HIV1 | F | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | Unknown | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| E10D, V32I, I84L, L101I, S119T, T124A, K136Q, V201I, K211R, T218I, L234V, D256E | S283G |
| >94UFRJ_58| codons 1-288 FLDGIDKAQDEHEKYHSNWRAMASDFNLPPVIAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGTN FTSATVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTRELQKQIIKIQNFRVYYRDSRDPVWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| K14R, I15V, E35D, M36I, R41K, R57K, Q61D, L63T, E65D |
| >94UFRJ_58| codons 1-99 PQITLWQRPLVTIRVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD DITIDICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| D123E, I135T, R172RK, I178M, E204Q, Q207E, R211K, F214L, V245Q, E248D, A272P, T286V, E291D, I293V, E297V, A327V, Q394L, A400T, E404D, K431T, V435A, A446S, L452K, V466A, V467I, D471E, T477A, H483Q, L491S, E492D, K512Q, S519N, A534S |
| >94UFRJ_58| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDMVI YQYMDDLYVGSDLEIGQHRTKIEQLREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGVKALTDVVPLTVEAE LELAENREILKEPVHGVYYDPSKDLIVEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGA HTNDVKQLTEAVQKIATESIVIWGKTPKFKLPILKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLETEPIAGAETFYVDGASNRETKKGKAGYVTDRGRQKAISLTETTNQKAELQ AIQLALQDSGSDVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSAGIRKVL |
References
| Author | Title | Citation |
| Thomson, MM | Analysis of near full-length genome sequences of HIV type 1 BF intersubtype recombinant viruses from Brazil reveals their independent origins and their lack of relationship to CRF12_BF. | ARHR, 2004 |