Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 94BR_RJ_97 | 94BR_RJ_97 | Brazil | 1994 | HIV1 | F | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | Unknown | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| S17N, V32I, L45Q, I72IV, I84L, L101I, S119T, T124A, K136Q, V165I, V201I, K211R, T218I, L234V, D256E | S283G |
| >94BR_RJ_97| codons 1-288 FLDGIDKAQEEHEKYHNNWRAMASDFNLPPVIAKEIVASCDKCQQKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGTN FTSATVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQIRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTRELQKQIIKIQNFRVYYRDSRDPVWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I15V, K20R, E35D, M36I, P39Q, R41K, R57K, Q61N, I72T, V82I, L89M |
| >94BR_RJ_97| codons 1-99 PQITLWQRPLVTIKVGGQLREALLDTGADDTVLEDINLQGKWKPKMIGGIGGFIKVKQYD NILIEICGHKATGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, T39M, K49R, D123E, I135L, S162C, E169N, K173A, Q174K, I178L, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297A, V317A, R356K, G359S, T377L, Q394L, A400T, V417I, K431T, A446S, L452Q, V466A, D471E, T477A, H483Q, L491S, S499T, S519N, K527N, A534S, V559I |
| >94BR_RJ_97| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICMEMEKEGKISRIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILNPFRAKNPDLVI YQYMDDLYVGSDLEIEQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTAEAE LELAENREILKEPVHGAYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRSA HTNDVKQLTEAVQKIALESIVIWGKTPKFKLPILKETWETWWTEYWQATWIPEWEFINTP PLVKLWYQLETEPIVGAETFYVDGASNRETKQGKAGYVTDRGRQKAVSLTETTNQKAELQ AIQLALQDSGSEVNIVTDTQYALGIIQAQPDKSESELVNQIIEQLINKEKVYLSWVPAHK GIGGNEQVDKLVSAGIRKIL |
References
| Author | Title | Citation |
| Thomson, MM | Analysis of near full-length genome sequences of HIV type 1 BF intersubtype recombinant viruses from Brazil reveals their independent origins and their lack of relationship to CRF12_BF. | ARHR, 2004 |