Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 01TZA195 | 01TZA195 | Tanzania | 2001 | HIV1 | A | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, A21T, S24N, V31I, S39N, M50I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, I135V, K136Q, F139Y, V165I, D167E, V201I, Q216N, T218I, L234I, I268L, D270H | S283G |
| >01TZA195| codons 1-288 FLDGIDKAQEEHERYHSNWRTMANDFNLPPIVAKEIVANCDKCQLKGEAIHGQVDCSPGM WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN FTSAAFKAACWWAGVQQEYGIPYNPQSQGVVESMNKELKKIIGQIREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKNIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKILRHYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, K14R, Q18L, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M |
| >01TZA195| codons 1-99 PQITLWQRPLVTVRIGGLLKEALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVKQYD QISIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, T39I, V60I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, Q207A, R211S, V245I, D250E, K275S, T286A, E291D, I293V, P294T, E312D, D324E, G335D, M357K, G359S, A360T, A371V, I375V, A376V, A400T, E404D, E432D, V435A, V466I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S |
| >01TZA195| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICIEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPEIII YQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIILPEKESWTVNDIQKLVGKLNWASQIYAGISVKQLCKLLRGAKALTDVVTLTEEAE LELAENREILKDPVHGVYYDPSKELIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRST HTNDVKQLTEVVQKVVTESIVIWGKTPKFKLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKDPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKIVSLTETTNQKTELH AIHLALQDSGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIEKLIGKDKVYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
References
| Author | Title | Citation |
| Arroyo, MA | HIV type 1 subtypes among blood donors in the Mbeya region of southwest Tanzania. | ARHR, 2004 |