Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA8402 | CA68638 | U.S. | 2006 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+AZT | 91 |
2 | 3TC+AZT+IDV | 174 |
3 | DDI+EFV+LPV | 39 |
4 | DDI+EFV+LPV+TDF | 100 |
5 | 3TC+APV+DDI+LPV+TDF | 61 |
6 | 3TC+APV+DDI+APV+LPV+TDF | 3 |
7 | 3TC+DDI+APV+LPV+TDF | 49 |
8 | FTC+RTV+T20+TDF+TPV | 23 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46L, I54V, V82A, L90M | L33F, T74P | L10I, I13V, N37ND, I62V, L63P, I93L |
>CA68638| codons 1-99 PQITLWQRPIVTVKIGGQLKEALLDTGADDTVFEEMDLPGRWKPKLIGGIGGFVKVRQYD QVPIEICGHKAIGPVLVGPTPANIIGRNLMTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, L74LV, M184V, T215Y | K103N | E6D, V35VL, T39TA, S68SG, A98AS, I142V, V179VI, T200TA, I202IV, E203Q, Q207D, A272P, R284K, T286A, I293V |
>CA68639| codons 1-301 PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALLEICAELEKEGKISKIGPENPYNTPV FAIKKKDGTKWRKVVDFRELNKRTQDFWEVQLGIPHPSGLKKNKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIII YQYVDDLYVGSDLEIGQHRAKVQELRDHLLRWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLKGAKALTEVVPLTEEAE L |
References
Author | Title | Citation |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |