Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| Pt159 | 04PS202B1 | South Africa | 2004 | HIV1 | C | Plasma | MC |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19I, K20R, E35D, M36L, N37D, R41K, L63P, I64M, H69K, L89M, I93L |
| >04PS202B1| codons 1-99 PQITLWQRPLVSIKVGGQIREALLDTGADDTVLEDLDLPGKWKPKMIGGIGGFIKVRQYD QIPMEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, T39E, S48T, W88C, K101R, K122E, D123N, I135R, E169K, K173A, D177E, T200A, I202T, Q207K, R211K, W212*, F214L, V245Q, S251H, A272P, K275R, K277R, E291D, V292I, I293V, Q334E, A355T, R356K, M357L, G359T, V365I, K366R, T377M, S379G, K390R, A400T, E404D, V435A, E449D, V458I, V466I, V467I, D471E, H483Y, L491S, E492K, S519N, K527N, K530R, A534S, A554R |
| >04PS202B1| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFCEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILKPFRAQNPEIVI YQYMDDLYVGSDLEIGQHRAKTEELRKHLLK*GLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDHWTVNDIQKLVGKLNWASQIYPGIRVRQLCKLLRGTKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGEGQWTYQIYQEPFKNLKTGKYTKLRTA HTNDIRQLTEAVQKIAMEGIVIWGKTPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIAGAETFYVDGAANRDTKLGKAGYITDRGRQKIISLTETTNQKTELQ AIYLALQDSGSKVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLINKERVYLSWVPAHK GIGGNEQVDKLVSRGIRKVL |
References
| Author | Title | Citation |
| Rousseau, CM | Large-scale amplification, cloning and sequencing of near full-length HIV-1 subtype C genomes. | J Virol Methods, 2006 |