Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| Pt135 | 03SK232B1 | South Africa | 2003 | HIV1 | C | Plasma | MC |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36A, T39E, S48T, V60I, V118I, K122E, D123S, S134R, I135T, E138A, K173T, Q174R, D177E, I178L, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T362N, T369A, A376T, T377M, K390R, E396D, A400T, T403A, E404D, V435I, R461K, D471E, T477A, Q480I, H483R, K530R, V531I, A534S, A554S | H96R |
| >03SK232B1| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPRPAGLKKKKSVTVLDVGDAYFSIPL DESFRKYTAFTIPRTNNATPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTRNPELVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIRVRHLCKLLRGAKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNLKTGKYAKMRTA HNNDVKQLAEAVQKITMESIVIWGKTPKFRLPIQKDTWETWWADYWQATWIPEWEFVNTP PLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDKGRQKVVSLTETTNQKAELI AIRLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKERIYLSWVPAHK GIGGNEQVDKLVSSGIRKVL |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19T, K20R, M36I, R41K, H69K, L89M, I93L |
| >03SK232B1| codons 1-99 PQITLWQRPLVSIKVGGQTREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
References
| Author | Title | Citation |
| Rousseau, CM | Large-scale amplification, cloning and sequencing of near full-length HIV-1 subtype C genomes. | J Virol Methods, 2006 |