<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
OK_TC023304 TC023304 Uganda 2004 HIV1 D Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, L33V, P39S, R41K, R57K, D60E, I64V  
>TC023304| codons 1-99
PQITLWQRPLVTVKIGGQLKEALLDTGADDTVVEEMNLSGKWKPKMIGGIGGFIKVKQYE
QILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        K22KN, V35T, S48T, K49R, V60I, V90I, K122E, D123N, Y146YS, E169EK, D177E, T200I, Q207G, R211K, V245K, D250E, K281KR, L282C, L283I, R284K, I293V, K331KN P133PL
>TC023304| codons 1-334
PISPIETVPVKLKPGMDGPKVNQWPLTEEKIKALTEICTEMEKEGKITRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DENFRKYTAFTILSINNETPGIRYQSNVLPQGWKGSPAIFQSSMTKILKPFRKQNPEIVI
YQYMDDLYVGSDLEIGQHRIKIEELRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIKLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCRCIKGTKALTEVVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQNQGQ

References
Author Title Citation
K'Aluoch, OF Characterization of HIV-1 subtypes and recombinants in a Uganda cohort by use of the gag, nef and pol genes. Direct Genbank Submission, 2005