Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA1833 | CA50894 | U.S. | 2004 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 44 |
| 2 | D4T | 87 |
| 3 | 3TC+AZT+IDV | 42 |
| 4 | 3TC+D4T+IDV | 26 |
| 5 | DDC+NFV+NVP | 47 |
| 6 | DDC+RTV+SQV | 31 |
| 7 | ABC+EFV+RTV+SQV | 38 |
| 8 | APV+D4T+EFV+RTV | 28 |
| 9 | 3TC+APV+D4T+DDI+RTV | 228 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| M46L, G48M, I54M, V82A, I84V | V11VI, L33F | L10I, T12P, I13V, K14R, L19V, L63T, A71V, I72T, T74A, P79PS, I93L |
| >CA50894| codons 1-99 PQITLWQRPIIPVRIGGQVKEALLDTGADDTVFEEMNLPGRWKPKLIMGIGGFMKVRQYD QITIEICGHKVTGAVLVGSTPANVIGRNLLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L, D67N, T69D, M184V, L210W, T215Y | K101EQ, Y181C, G190A | A98G, V108I | K20R, T39E, E40EK, E44D, V118I, K122E, I135T, T165TI, R172RK, G196E, E203K, H208Y, R211K, H221Y, A272S, V276T, K277R, Q278E, L283I, I293V, P294S, E297K |
| >CA50895| codons 1-300 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICEKLEKDGKISKIGPENPYNTPV FAIKKKNSDKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLQKKKSVTILDVGDAYFSIPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFKKQNPDIVI CQYVDDLYVASDLEIEQHRTKIKELRQYLWKWGFYTPDKKYQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYSGIKTRELCKLIRGTKALTEVVSLTKEAE |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |