Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA5951 | CA50780 | U.S. | 2004 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 113 |
| 2 | 3TC+AZT | 9 |
| 3 | 3TC+AZT+IDV | 52 |
| 4 | 3TC+D4T+NVP | 57 |
| 5 | None | 187 |
| 6 | 3TC+ABC+D4T+LPV | 26 |
| 7 | None | 12 |
| 8 | 3TC+ABC+D4T+LPV | 97 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| V32I, M46L, I47A, V82A | L33F | L10I, T12P, L19I, E35D, M36I, L63P, I64V, A71V, I72V, I93L |
| >CA50780| codons 1-99 PQITLWQRPIVPIKIGGQIKEALLDTGADDTIFEDINLPGRWKPKLAGGIGGFIKVRQYD QIPVEICGHKVVGTVLVGPTPANIIGRNLLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L, D67N, M184V, L210W, T215Y | K32N, V35K, T39A, K49KR, R83RK, K122E, K173Q, Q174K, I178M, E203K, R211Q, K223Q, A272P, R284K, T286A |
| >CA50781| codons 1-333 PISPIETVPVKLKPGMDGPKVKQWPLTEEKINALKEICAELEKEGKISRIGPENPYNTPV FAIKKKNSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRQKNPDMVI YQYVDDLYVGSDLEIGQHRTKIKELRQHLWQWGFYTPDKKHQQEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLKGAKALTEVIPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQG |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |