Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
37811 | 37811 | Brazil | 2001 | HIV1 | F | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39R, V106I, V118I, S162C, E169A, K173T, Q174K, Q207E, R211RK, F214L, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297V |
>37811| codons 1-335 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICREMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSITVLDVGDAYFSIPL DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILAPFRTKNPDIVI YQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTVEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQG |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
K14R, I15V, G17E, E35D, M36I, R57K, Q61N, I62V, L63S, L89M |
>37811| codons 1-99 PQITLWQRPLVTIRVGEQLKEALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVKQYD NVSIEICGHKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
References
Author | Title | Citation |
Eshleman, SH | Performance of the Celera Diagnostics ViroSeq HIV-1 genotyping system for sequence-based analysis of diverse human immunodeficiency virus type 1 strains. | J Clin Microbiol, 2004 |