Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
ABB51 | ABB51 | Cameroon | 2001 | HIV1 | F | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I15V, K20R, E35D, M36I, P39S, R41K, I62IV, L63P, H69HQ, L89M |
>ABB51| codons 1-99 PQITLWQRPLVTIKVGGQLREALLDTGADDTVLEDINLSGKWKPKMIGGIGGFIKVRQYD QVPIEICGQKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, D123E, I135IV, K166KR, K173AEV, Q174K, D177E, I202IV, Q207EK, R211RK, P243A, V245Q, E248D, D250S, A272P, K275R, K277R, Q278H, T286A, E291D, I293V, E297A, L303M |
>ABB51| codons 1-333 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRVKNPEIVI YQYMDDLYVGSDLEIGQHRTKVEELRKHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQAIQLPDKSSWTVNDIQKLVGKLNWASQIYPGIRVRHLCKLLRGAKALTDVVPLTAEAE LEMAENREILKEPVHGVYYDPSKDLIAEIQKQG |
References
Author | Title | Citation |
Eshleman, SH | Performance of the Celera Diagnostics ViroSeq HIV-1 genotyping system for sequence-based analysis of diverse human immunodeficiency virus type 1 strains. | J Clin Microbiol, 2004 |