Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
AB511 | AB511 | Cameroon | 2001 | HIV1 | CRF01_AE | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, K14KR, K20R, E35DN, M36I, N37D, R41K, H69K, L89M |
>AB511| codons 1-99 PQITLWQRPLVTVRIGGQLREALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
P4H, K11A, V21VI, V35T, T39I, D121Y, K122E, D123G, I135V, E169D, K173A, Q174K, D177E, I178IV, G196E, Q207A, R211S, V245Q, K275KR, K281KR, T286A, E291D, I293V, E312D |
>AB511| codons 1-333 PISHIETVPVALKPGMDGPKIKQWPLTEEKIKALTEICIEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEGFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILDPFRAKNPEVVI YQYMDDLYVGSDLEIEQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIRVKQLCRLLRGAKALTDVVPLTEEAE LELAENREILKDPVHGVYYDPSKDLIAEIQKQG |
References
Author | Title | Citation |
Eshleman, SH | Performance of the Celera Diagnostics ViroSeq HIV-1 genotyping system for sequence-based analysis of diverse human immunodeficiency virus type 1 strains. | J Clin Microbiol, 2004 |