Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
ABB208 | ABB208 | Cameroon | 2001 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
E35D, M36I, R41K, I62V, L63P, H69Q |
>ABB208| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QVPIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39A, E40D, K49R, V60I, R83K, D123E, I135T, T139S, S162C, R172K, D177E, I178L, V179T, T200A, E204K, Q207E, R211K, F214L, V245T, S251D, A272P, K281R, T286A, V292I, E297K, K311R, D324E, I329V, G333E, Q334E | Q182AS |
>ABB208| codons 1-335 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNESPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFKKQNPELTI YAYMDDLYVGSDLEIGQHRAKIEKLREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPITLPEKDDWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTEIIPLTKEAE LELAENREILREPVHGVYYDPSKELIAEVQKQEEG |
References
Author | Title | Citation |
Eshleman, SH | Performance of the Celera Diagnostics ViroSeq HIV-1 genotyping system for sequence-based analysis of diverse human immunodeficiency virus type 1 strains. | J Clin Microbiol, 2004 |