Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
SU009 | SU009 | Sudan | 1999 | HIV1 | C | PBMC | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, M36I, R41K, K45R, L63S, I64L, H69K, L89M, I93L |
>SU009| codons 1-99 PQITLWQRPLVSIKVGGQLKEALLDTGADDTVLEEINLPGKWKPRMIGGIGGFIKVRQYD QISLEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36A, T39E, E40D, K122E, D123G, K173A, Q174K, D177E, T200E, Q207E, R211K, V245Q |
>SU009| codons 1-252 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVI YQYMDDLYVGSDLEIGQHREKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSW |
References
Author | Title | Citation |
Hierholzer, M | HIV type 1 strains from east and west Africa are intermixed in Sudan. | ARHR, 2002 |