Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
SU488 | SU488 | Sudan | 1998 | HIV1 | D | PBMC | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, I15V, G16E, N37T, P39S, R41K, D60E, L63P, A71T, I93L |
>SU488| codons 1-99 PQITLWQRPLVTVKVEGQLKEALLDTGADDTVLEEMTLSGKWKPKMIGGIGGFIKVRQYE QIPIEICGHKTIGTVLVGPTPVNIIGRNLLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, K49R, V60I, D121Y, K122E, I135T, I142V, D177E, I178M, T200I, Q207E, R211K, V245K, D250E |
>SU488| codons 1-252 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVI YQYMDDLYVGSDLEIGQHRIKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKESW |
References
Author | Title | Citation |
Hierholzer, M | HIV type 1 strains from east and west Africa are intermixed in Sudan. | ARHR, 2002 |