Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
TK3007 | TK3007b | Denmark | 2002 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | ABC+ D4T+ DDI | 12 |
2 | None | 9 |
3 | 3TC+ AZT+ IDV+ RTV | 58 |
4 | 3TC+ AZT+ EFV | 33 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | K101E, V106M | E28A, V35T, T39AV, S48T, K122E, D123S, S162AD, K173T, D177E, T200A, Q207E, P243T, V245Q, E291D, V292I, I293V, E312EG |
>TK3007b| codons 1-324 PISPIETVPVKLKPGMDGPKVKQWPLTAEKIKALTEICAEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLEKKKSMTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTQNPEIVI YQYVDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQTIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTDIVPLTEEAE LELAENREILKGPVHGVYYDPSKD |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, L19M, E34A, M36I, R41K, L63P, H69K, L89M, I93L |
>TK3007b| codons 1-99 PQITLWQRPLVSIKVGGQMKEALLDTGADDTVLAEINLPGKWKPKMIGGIGGFIKVRQYD QIPIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
References
Author | Title | Citation |
Non-B Workgroup | Impact of HIV-1 subtype and antiretroviral therapy on protease and reverse transcriptase genotype: Results of a global collaboration. | PLoS Med, 2005 |