Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
VL98SN65HALD | 00SN65 | Africa | 2000 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | DDI+ D4T | NA |
2 | None | NA |
3 | AZT+ 3TC+ IDV | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L89V | L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R |
>00SN65| codons 1-99 PQITLWQRPVVTVKIGGQPIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKRAIGTVLVGPTPVNIIGRNVLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | V35T, E40D, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245E, T286A, A288T, E291D, V292I, I293V, P294T, L295M, S322A, R356K, M357K, R358K, G359S, A371V, K374R, I375V, T377S, K390R, T403M |
>00SN65| codons 1-429 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEMVI YQYVDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKTLTDIVTMTEEAE LELAENREILKEPVHGVYYDPAKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKKKSA HTNDVKQLTEVVQRVASESIVIWGKTPKFRLPIQKETWEAWWMEYWQATWIPEWEFVNTP PLVKLWYQL |
References
Author | Title | Citation |
Vergne, L | Low rate of genotypic HIV-1 drug-resistant strains in the Senegalese government initiative of access to antiretroviral therapy. | AIDS, 2003 |