Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA21042 | CA48397 | U.S. | 2004 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | 3TC+D4T+NFV | 39 |
| 2 | 3TC+D4T+LPV+NVP | 134 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| M46I, I54V, V82A | L10F | N37S, R41K, L63A |
| >CA48397| codons 1-99 PQITLWQRPFVTIKIGGQLKEALLDTGADDTVLEEMSLPGKWKPKIIGGIGGFVKVRQYD QIAIEICGHKAIGTVLVGPTPANIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| L74I, M184V | K103N | P225H | K11R, I31L, K104R, K122E, I142V, R211K, L228R, T240A, V245E, D250E, A272P, K277R, L283I, P294S, T296S, E297K, K311R, D320E, G333E, Q334H, R356K, M357I |
| >CA48398| codons 1-370 PISPIETVPVRLKPGMDGPKVKQWPLTEEKLKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKIVDFRELNKRTQDFWEVQLGIPHPAGLKKNRSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEHPFRWMGYELHPDKWA VQPIELPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLIRGTKALTEVISLSKEAE LELAENREILREPVHGVYYEPSKDLIAEIQKQEHGQWTYQIYQEPFKNLKTGKYAKIRGA HTNDVKQLTE |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |