Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA6356 | CA48093 | U.S. | 2004 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT+DDC | 139 |
| 2 | 3TC+AZT+IDV | 48 |
| 3 | 3TC+AZT+SQV | 35 |
| 4 | 3TC+AZT | 78 |
| 5 | D4T+DDI+NFV | 52 |
| 6 | D4T+EFV+NFV | 165 |
| 7 | D4T+NFV+TDF | 64 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| M46I | I13V, E35D, I62V, L63P, A71V, T74A, V77I, I93L |
| >CA48093| codons 1-99 PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDMNLPGRWKPKIIGGIGGFIKVRQYD QVPIEICGHKVIGAVLIGPTPVNIIGRNLLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41ML, D67N, K70KR, L210LW, T215TNSY | K219KHNQ | K103KN | P225PH | E6K, E44ED, V118VI, K122E, I202IV, R211RK, V241VIM | E53EK |
| >CA48094| codons 1-280 PISPIKTVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKDGKISKIGPKNPYNTPV FAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRTKVEELRQHLWKWGFYTPDQKHQKEHPFLWMGYELHPDKWT MQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLC |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |