Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
ESH_Pat139 | ESH517 | Uganda | 1998 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | 52 |
2 | NVP | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12P, I13V, R41K, L63P, I64V, I72M, V77I |
>ESH517| codons 1-99 PQITLWQRPLVPVKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYD QIPVEICGHKAMGTVLIGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K20R, V35T, E40D, K49R, V60I, K104R, K122E, T139A, Q174R, D177E, I178M, T200I, Q207E, R211K, V245N, E248Q, D250E, A272P, K275R, V276I, Q278H, L282C, T286A, I293V |
>ESH517| codons 1-334 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNEAPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKRNPEMVI YQYMDDLYVGSDLEIGQHRIKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPINLPQKESWTVNDIQKLVGKLNWASQIYPGIRIKHLCKCLRGAKALTEVVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQ |
References
Author | Title | Citation |
Eshleman, SH | Characterization of nevirapine resistance mutations in women with subtype A vs. D HIV-1 6-8 weeks after single-dose nevirapine. | JAIDS, 2004 |