Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA4859 | CA42722 | U.S. | 2004 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+AZT+NVP | 226 |
2 | None | 22 |
3 | 3TC+AZT+NVP | 54 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, M184V, L210W, T215Y | Y181C | V179DE | K20KR, K32N, V35I, T39A, K43E, K49R, V60I, R83K, K102Q, K103R, I135K, G196GE, R211RK, L228R, R284K, T286A, V292I | V111IM |
>CA42722| codons 1-302 PISPIETVPVKLKPGMDGPRVKQWPLTEEKINALIEICAELEEEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKQRKSVTVLDMGDAYFSVPL DKDFRKYTAFTIPSKNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIEI CQYVDDLYVGSDLEIEQHRTKIEELRQHLWKWGFYTPDKKHQKEPPFRWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLKGAKALTEIIPLTEEAE LE |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12TA, I13IV, K14R, L63P, I64V |
>CA42721| codons 1-99 PQITLWQRPLVAVRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QIPVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |