<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CA7108 CA41295 U.S. 2003 HIV1 B Plasma None

Treatment History
Order Regimen Weeks
1 AZT+DDC 117
2 3TC+D4T+IDV 52
3 3TC+D4T+NFV+NVP 39
4 Unknown 183
5 3TC+D4T+DDI+LPV+T20+TDF 87
6 3TC+LPV+T20+TDF 29

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
M41L, D67N, T69D, L74LI, M184V, L210W, T215Y   K103N, Y181C   V8I, K43N, E44D, V111I, V118I, K122E, I135T, I142IT, G196E, T200A, E203D, H208Y, R211K, H221Y, V245L, A272P, K277R, V292I, I293V, E297K  
>CA41295| codons 1-300
PISPIETIPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELENDGKISKIGPENPYNTPV
FAIKKKNSDKWRKIVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDIGDAYFSIPL
DEDFRKYTAFTIPSTNNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI
CQYVDDLYVGSDLEIEQHRAKIDELRQYLWKWGFYTPDKKYQKEPPFLWMGYELHPDKWT
VQPILLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTKEAE

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
M46I, I84V, L90M L10F, G73T, N83D K20R, E34Q, M36I, R41K, I62V, L63P, I64V, I93L  
>CA41294| codons 1-99
PQITLWQRPFVTIKIGGQLREALLDTGADDTVLQEINLPGKWKPKIIGGIGGFIKVRQYD
QVPVEICGHKAITTVLVGPTPVDVIGRNLMTQLGCTLNF

References
Author Title Citation
Rhee, SY HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. J Infect Dis, 2005