Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA9860 | CA41284 | U.S. | 2003 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT+DDC | 65 |
| 2 | AZT+DDI | 70 |
| 3 | 3TC+AZT+IDV | 252 |
| 4 | 3TC+D4T+RTV+SQV | 70 |
| 5 | D4T+DDI+EFV | 114 |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I54V | L10V, I13V, E35D, M36I, N37D, I62V, L63P, I66FV, H69R, A71T, I72M |
| >CA41284| codons 1-99 PQITLWQRPVVTVKIGGQLKEALLDTGADDTVLEDIDLPGRWKPKMIGGIGGFVKVRQYD QVPIEVCGRKTMGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L, D67N, L210W, T215Y | K101P, K103N | K20R, T39S, E44D, V118I, K122KE, I135IL, T200S, R211E, T286A, E297A, K311R |
| >CA41285| codons 1-350 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICSELEKDGKISKIGPENPYNTPV FAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLPKNKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRSKIEELRQHLWEWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVIPLTAEAE LELAENREILREPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLK |
References
| Author | Title | Citation |
| Rhee, SY | Predictive Value of HIV-1 Genotypic Resistance Test Interpretation Algorithms. | J Infect Dis, 2009 |