Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA1280 | CA38142 | U.S. | 2000 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+ RTV+ AZT | 4 |
2 | 3TC+ AZT+ NFV | 34 |
3 | Unknown | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, L19I, L63P, A71T, I72IT, V77I, I93L |
>CA38142| codons 1-98 PQITLWQRPLVTVKIGGQIKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGHKTTGTVLIGPTPVNIIGRNLLTQLGCTLN |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
T215Y | K101P, K103N | K104R, I135R, V189I, V245E |
>CA38143| codons 1-249 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLPKNRSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYMDDLYIGSDLEIGQHRTKIEELRQHLLRWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEK |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |