Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA5042 | CA38123 | U.S. | 2003 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 39 |
| 2 | 3TC+AZT+IDV | 144 |
| 3 | ABC+D4T+RTV+SQV | 21 |
| 4 | None | 18 |
| 5 | ABC+D4T+EFV+RTV+SQV | 26 |
| 6 | None | 31 |
| 7 | 3TC+ABC+D4T | 18 |
| 8 | 3TC+AZT+DDI | 47 |
| 9 | DDI+EFV+TDF | 54 |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| D67N, K70R, L74IV | T215I, K219E | L100I, K103N | D123E, I135T, K166R, G196E, T200A, I202V, L228LR, K277R, L283I, A288T, I293V, P294I, E297P |
| >CA38123| codons 1-299 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKNSTRWRKVVDFRELNKRTQDFWEVQLGIPHPAGIKKNKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVI YQYMDDLYVGSDLEIEQHRAKVEELRQHLLRWGFITPDEKHQKEPPFRWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLIRGTKTLTEVVILTPEA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, K14KR, L19I, L63S, V77I |
| >CA38122| codons 1-99 PQITLWQRPLVSIRIGGQIKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QISIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNF |
References
| Author | Title | Citation |
| Rhee, SY | HIV-1 Protease and Reverse Transcriptase Mutations: Correlations with Antiretroviral Therapy in Subtype B Isolates and Implications for Drug-Resistance Surveillance. | J Infect Dis, 2005 |