Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA1485 | CA37814 | U.S. | 2003 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | 74 |
2 | D4T+DDC | 31 |
3 | 3TC+AZT | 9 |
4 | 3TC+AZT+IDV | 31 |
5 | AZT+DDI+IDV | 22 |
6 | 3TC+DDI+NFV | 17 |
7 | None | 61 |
8 | D4T+DDI+SQV | 22 |
9 | AZT+EFV+SQV | 48 |
10 | ABC+AZT+EFV+SQV | 165 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, D67N, T69D, K70R, T215F | K219Q | V106A | V179D | K20R, V35M, T39A, E40D, V90I, A98S, K103R, K104N, I135T, S162Y, R211Q, L228H, V245E, T286A, E297K |
>CA37814| codons 1-300 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALMEICADLEKEGKISKIGPENPYNTPV FAIKKKNSDRWRKLVDFRELNKRTQDFWEIQLGIPHPSGLKKRNSATVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQYSMTKILEPFRKQNPDIDI YQYMDDLYVGSDLEIGQHRTKIEELRQHLLQWGFFTPDQKHQKEPPFHWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVIPLTKEAE |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10I, K14R, L63A, I72V, V77I, I93L |
>CA37813| codons 1-99 PQITLWQRPIVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QIAIEICGHKAVGTVLIGPTPVNIIGRNLLTQLGCTLNF |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |