Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA14185 | CA34309 | U.S. | 2002 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | 26 |
2 | None | 104 |
3 | 3TC+D4T | 26 |
4 | D4T+DDC+IDV | 39 |
5 | 3TC+D4T+IDV | 183 |
6 | 3TC+D4T+NFV | 57 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | T215D, K219KR | K20R, I135V, S162C, Q174H, V179T, T200A, Q207E, V245K |
>CA34309| codons 1-295 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKHNPDITI YQYVDDLYVGSDLEIGQHRAKIEELREHLLRWGFDTPDRKHQKEPPFLWMGYELHPDKWT VQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVIPL |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
D30N | N88ND | R41K, R57K, I62V, L63P, A71T, V77I, I93L |
>CA33294| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADNTVLEEMNLPGKWKPKMIGGIGGFIKVKQYD QVPIEICGHKTIGTVLIGPTPVNIIGRDLLTQLGCTLNF |
References
Author | Title | Citation |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |