Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA4497 | CA34161 | U.S. | 2002 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | 61 |
2 | 3TC+AZT+IDV | 44 |
3 | DDC+SQV | 26 |
4 | D4T+NFV | 70 |
5 | 3TC+D4T+NFV | 33 |
6 | ABC+AZT+NVP+RTV+SQV | 93 |
7 | ABC+AZT+LPV+NVP | 26 |
8 | 3TC+APV+LPV+TDF | 58 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I54V, V82T, I84V | L89V | L10I, V11L, I13V, I15V, K20I, E35D, M36I, N37D, D60E, L63P, K70E, A71I, Q92K |
>CA34161| codons 1-99 PQITLWQRPILTVKVGGQLIEALLDTGADDTVLEDIDLPGRWKPKMIGGIGGFVKVRQYE QIPIEICGHEIIGTVLVGPTPTNVIGRNVLTKIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41ML, M184V, T215Y | K20KR, V35T, T39TA, E44ED, K102KR, K122E, I135T, K166KR, L210F, R211K, A272P, K277R, L283I, R284K, I293V |
>CA35169| codons 1-300 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICAELEKDGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVI YQYVDDLYVGSDLEIGQHRTKIEELRQHLFKWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLIKGTKALTEVVPLTEEAE |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |